Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 NIFKP9-201ENST00000419265 221 ntBASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 CD177P1-201ENST00000606252 935 ntBASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 AC073195.1-201ENST00000607241 877 ntBASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPH3AQ9Y2J0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPH3AQ9Y2J0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.64■□□□□ 0.42
RPH3AQ9Y2J0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 BX088651.1-201ENST00000540551 451 ntBASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPH3AQ9Y2J0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
RPH3AQ9Y2J0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms