Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 NUDT16P1-203ENST00000513809 620 ntBASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF3C4Q9UKN8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 BX088651.1-201ENST00000540551 451 ntBASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.73■□□□□ 0.91
GTF3C4Q9UKN8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 AC098818.2-201ENST00000564925 2320 ntBASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 REXO1L12P-201ENST00000622156 912 ntBASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 AC073912.3-201ENST00000624414 853 ntBASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF3C4Q9UKN8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 KRT8P8-201ENST00000434750 1448 ntBASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 REXO1L10P-201ENST00000615707 1290 ntBASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 AL445675.2-201ENST00000620291 557 ntBASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GTF3C4Q9UKN8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
GTF3C4Q9UKN8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
GTF3C4Q9UKN8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
GTF3C4Q9UKN8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 AP000974.1-201ENST00000623909 2387 ntBASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GTF3C4Q9UKN8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms