Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 BX119927.1-201ENST00000636596 1552 ntBASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 MIR572-201ENST00000384983 95 ntBASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN2Q9UHD9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 AP006587.3-201ENST00000525742 1516 ntBASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN2Q9UHD9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN2Q9UHD9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms