Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 Z82202.1-201ENST00000623446 1880 ntBASIC19.48■□□□□ 0.71
NCKIPSDQ9NZQ3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 AC087499.1-201ENST00000418141 1075 ntBASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 AC133561.5-201ENST00000635547 218 ntBASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCKIPSDQ9NZQ3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 AP001271.2-201ENST00000624018 1556 ntBASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 MIR1224-201ENST00000408193 85 ntBASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 AL355075.4-201ENST00000554988 638 ntBASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 AP003071.4-201ENST00000562276 1284 ntBASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 CD177P1-201ENST00000606252 935 ntBASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 AC073195.1-201ENST00000607241 877 ntBASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 AC097493.4-201ENST00000641197 219 ntBASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.46■□□□□ 0.71
NCKIPSDQ9NZQ3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCKIPSDQ9NZQ3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 TNXA-203ENST00000507684 2038 ntBASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms