Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR718-201ENST00000390190 70 ntBASIC20.57■□□□□ 0.88
CISHQ9NSE2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 AC026271.3-201ENST00000571884 352 ntBASIC20.56■□□□□ 0.88
CISHQ9NSE2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.56■□□□□ 0.88
CISHQ9NSE2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CISHQ9NSE2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.55■□□□□ 0.88
CISHQ9NSE2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.55■□□□□ 0.88
CISHQ9NSE2 AC066615.1-201ENST00000640911 628 ntBASIC20.55■□□□□ 0.88
CISHQ9NSE2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CISHQ9NSE2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CISHQ9NSE2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CISHQ9NSE2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CISHQ9NSE2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CISHQ9NSE2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CISHQ9NSE2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CISHQ9NSE2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CISHQ9NSE2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 RCC2P6-201ENST00000526625 1557 ntBASIC20.54■□□□□ 0.88
CISHQ9NSE2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CISHQ9NSE2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 AC141586.3-201ENST00000562166 1838 ntBASIC20.53■□□□□ 0.88
CISHQ9NSE2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.53■□□□□ 0.88
CISHQ9NSE2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CISHQ9NSE2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms