Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE5Q9HCH3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE5Q9HCH3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE5Q9HCH3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 TSPY14P-201ENST00000303979 915 ntBASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE5Q9HCH3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CPNE5Q9HCH3 FSCN1P1-201ENST00000568912 1481 ntBASIC18.58■□□□□ 0.57
CPNE5Q9HCH3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE5Q9HCH3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE5Q9HCH3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CPNE5Q9HCH3 INGX-201ENST00000359239 846 ntBASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 MESTP1-201ENST00000404287 994 ntBASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 AC117947.1-201ENST00000427448 529 ntBASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 KRT18P48-201ENST00000434763 852 ntBASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 AC073314.1-201ENST00000568729 2216 ntBASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE5Q9HCH3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE5Q9HCH3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms