Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PIF1Q9H611 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PIF1Q9H611 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PIF1Q9H611 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.39■□□□□ 0.53
PIF1Q9H611 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PIF1Q9H611 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PIF1Q9H611 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.39■□□□□ 0.53
PIF1Q9H611 KRT17P1-201ENST00000399211 1546 ntBASIC18.39■□□□□ 0.53
PIF1Q9H611 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.38■□□□□ 0.53
PIF1Q9H611 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.38■□□□□ 0.53
PIF1Q9H611 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.38■□□□□ 0.53
PIF1Q9H611 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.38■□□□□ 0.53
PIF1Q9H611 AC004911.1-201ENST00000416316 871 ntBASIC18.38■□□□□ 0.53
PIF1Q9H611 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PIF1Q9H611 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.38■□□□□ 0.53
PIF1Q9H611 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
PIF1Q9H611 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PIF1Q9H611 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PIF1Q9H611 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PIF1Q9H611 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PIF1Q9H611 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.37■□□□□ 0.53
PIF1Q9H611 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.37■□□□□ 0.53
PIF1Q9H611 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.37■□□□□ 0.53
PIF1Q9H611 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 AL589743.5-201ENST00000616611 1050 ntBASIC18.37■□□□□ 0.53
PIF1Q9H611 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.37■□□□□ 0.53
PIF1Q9H611 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PIF1Q9H611 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.37■□□□□ 0.53
PIF1Q9H611 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.37■□□□□ 0.53
PIF1Q9H611 AC010980.2-201ENST00000587099 1412 ntBASIC18.37■□□□□ 0.53
PIF1Q9H611 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.37■□□□□ 0.53
PIF1Q9H611 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.37■□□□□ 0.53
PIF1Q9H611 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PIF1Q9H611 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.37■□□□□ 0.53
PIF1Q9H611 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PIF1Q9H611 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PIF1Q9H611 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PIF1Q9H611 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PIF1Q9H611 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.36■□□□□ 0.53
PIF1Q9H611 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.36■□□□□ 0.53
PIF1Q9H611 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.36■□□□□ 0.53
PIF1Q9H611 AC141586.3-201ENST00000562166 1838 ntBASIC18.36■□□□□ 0.53
PIF1Q9H611 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.36■□□□□ 0.53
PIF1Q9H611 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.36■□□□□ 0.53
PIF1Q9H611 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PIF1Q9H611 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PIF1Q9H611 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms