Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NELFAQ9H3P2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NELFAQ9H3P2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.17■□□□□ 0.34
NELFAQ9H3P2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.17■□□□□ 0.34
NELFAQ9H3P2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NELFAQ9H3P2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NELFAQ9H3P2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 KRT8P8-201ENST00000434750 1448 ntBASIC17.16■□□□□ 0.34
NELFAQ9H3P2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NELFAQ9H3P2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 TUBB8P6-201ENST00000436895 1288 ntBASIC17.15■□□□□ 0.34
NELFAQ9H3P2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.15■□□□□ 0.34
NELFAQ9H3P2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
NELFAQ9H3P2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.14■□□□□ 0.34
NELFAQ9H3P2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 Z82202.1-201ENST00000623446 1880 ntBASIC17.14■□□□□ 0.33
NELFAQ9H3P2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 AC004264.1-201ENST00000608354 794 ntBASIC17.14■□□□□ 0.33
NELFAQ9H3P2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NELFAQ9H3P2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms