Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 COX11P1-201ENST00000489116 835 ntBASIC20.11■□□□□ 0.81
LRRC3Q9BY71 AP003041.3-201ENST00000527151 707 ntBASIC20.11■□□□□ 0.81
LRRC3Q9BY71 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 TSPY5P-201ENST00000426936 936 ntBASIC20.1■□□□□ 0.81
LRRC3Q9BY71 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 AC011558.1-201ENST00000623459 338 ntBASIC20.1■□□□□ 0.81
LRRC3Q9BY71 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRC3Q9BY71 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.09■□□□□ 0.81
LRRC3Q9BY71 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 TCF3P1-201ENST00000423021 1937 ntBASIC20.09■□□□□ 0.81
LRRC3Q9BY71 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRRC3Q9BY71 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 AL031133.1-201ENST00000406807 723 ntBASIC20.08■□□□□ 0.81
LRRC3Q9BY71 PRSS44-201ENST00000515154 1146 ntBASIC20.08■□□□□ 0.81
LRRC3Q9BY71 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LRRC3Q9BY71 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 AC104417.2-201ENST00000562989 1793 ntBASIC20.08■□□□□ 0.8
LRRC3Q9BY71 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LRRC3Q9BY71 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms