Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP4Q9BWG4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SSBP4Q9BWG4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 PTBP1P-201ENST00000554374 1601 ntBASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP4Q9BWG4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 AC131212.1-201ENST00000613771 668 ntBASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 BICD1-207ENST00000551848 1962 ntBASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP4Q9BWG4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 AP001271.2-201ENST00000624018 1556 ntBASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 KRT8P17-201ENST00000453110 1448 ntBASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP4Q9BWG4 AC067852.2-201ENST00000590513 2313 ntBASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.5□□□□□ -0.09
SSBP4Q9BWG4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms