Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 AC093484.2-201ENST00000580996 2166 ntBASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 AL355355.2-201ENST00000442321 338 ntBASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 AC026271.3-201ENST00000571884 352 ntBASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 SDHAP1-207ENST00000440850 2000 ntBASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCM2Q9BSQ5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 AL596275.1-201ENST00000423464 877 ntBASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 Z85996.1-201ENST00000494644 937 ntBASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 AC026471.5-201ENST00000615068 467 ntBASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCM2Q9BSQ5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 TSPY7P-201ENST00000431358 1114 ntBASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 NUDT16P1-203ENST00000513809 620 ntBASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCM2Q9BSQ5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms