Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 CDCA4P2-201ENST00000441182 718 ntBASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 AC026185.1-201ENST00000445748 174 ntBASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 AF201337.1-201ENST00000520239 748 ntBASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 AC023632.3-201ENST00000521633 145 ntBASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 AL390961.4-201ENST00000623958 2535 ntBASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC47A1Q96FL8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 AC105036.2-201ENST00000569468 176 ntBASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC47A1Q96FL8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
SLC47A1Q96FL8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLC47A1Q96FL8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC47A1Q96FL8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC47A1Q96FL8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC47A1Q96FL8 AC018553.1-201ENST00000616682 1458 ntBASIC18.14■□□□□ 0.5
SLC47A1Q96FL8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLC47A1Q96FL8 MKRN4P-201ENST00000444706 1521 ntBASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 WIZP1-201ENST00000531444 2299 ntBASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC47A1Q96FL8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms