Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF428Q96B54 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF428Q96B54 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 RN7SL850P-201ENST00000579959 291 ntBASIC24.8■■□□□ 1.56
ZNF428Q96B54 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF428Q96B54 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF428Q96B54 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF428Q96B54 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF428Q96B54 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZNF428Q96B54 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZNF428Q96B54 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZNF428Q96B54 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 AC004980.1-204ENST00000429707 299 ntBASIC24.79■■□□□ 1.56
ZNF428Q96B54 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZNF428Q96B54 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ZNF428Q96B54 AC097493.4-201ENST00000641197 219 ntBASIC24.79■■□□□ 1.56
ZNF428Q96B54 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZNF428Q96B54 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
ZNF428Q96B54 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZNF428Q96B54 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.78■■□□□ 1.56
ZNF428Q96B54 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF428Q96B54 KRT16P1-201ENST00000399124 1418 ntBASIC24.78■■□□□ 1.56
ZNF428Q96B54 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
ZNF428Q96B54 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF428Q96B54 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF428Q96B54 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF428Q96B54 Z85996.1-201ENST00000494644 937 ntBASIC24.78■■□□□ 1.56
ZNF428Q96B54 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.78■■□□□ 1.56
ZNF428Q96B54 AC131212.4-201ENST00000623606 975 ntBASIC24.78■■□□□ 1.56
ZNF428Q96B54 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.78■■□□□ 1.56
ZNF428Q96B54 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF428Q96B54 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF428Q96B54 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF428Q96B54 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 AC141586.3-201ENST00000562166 1838 ntBASIC24.77■■□□□ 1.56
ZNF428Q96B54 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ZNF428Q96B54 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZNF428Q96B54 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ZNF428Q96B54 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ZNF428Q96B54 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZNF428Q96B54 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
ZNF428Q96B54 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZNF428Q96B54 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF428Q96B54 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF428Q96B54 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF428Q96B54 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF428Q96B54 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 MESTP1-201ENST00000404287 994 ntBASIC24.76■■□□□ 1.55
ZNF428Q96B54 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF428Q96B54 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
ZNF428Q96B54 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF428Q96B54 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF428Q96B54 KRT8P41-201ENST00000533985 1514 ntBASIC24.76■■□□□ 1.55
ZNF428Q96B54 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF428Q96B54 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF428Q96B54 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC24.75■■□□□ 1.55
ZNF428Q96B54 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF428Q96B54 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF428Q96B54 AC007952.6-201ENST00000573168 2673 ntBASIC24.75■■□□□ 1.55
ZNF428Q96B54 AC003957.1-201ENST00000625108 2673 ntBASIC24.75■■□□□ 1.55
ZNF428Q96B54 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF428Q96B54 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF428Q96B54 UNC93B2-201ENST00000285383 730 ntBASIC24.75■■□□□ 1.55
ZNF428Q96B54 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF428Q96B54 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF428Q96B54 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.75■■□□□ 1.55
ZNF428Q96B54 AC011506.1-201ENST00000474329 610 ntBASIC24.75■■□□□ 1.55
ZNF428Q96B54 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.75■■□□□ 1.55
ZNF428Q96B54 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF428Q96B54 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms