Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.66■□□□□ 0.58
NCLNQ969V3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.66■□□□□ 0.58
NCLNQ969V3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NCLNQ969V3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.66■□□□□ 0.58
NCLNQ969V3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.66■□□□□ 0.58
NCLNQ969V3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.66■□□□□ 0.58
NCLNQ969V3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NCLNQ969V3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.66■□□□□ 0.58
NCLNQ969V3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.66■□□□□ 0.58
NCLNQ969V3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.65■□□□□ 0.58
NCLNQ969V3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
NCLNQ969V3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.65■□□□□ 0.58
NCLNQ969V3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
NCLNQ969V3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NCLNQ969V3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.65■□□□□ 0.58
NCLNQ969V3 AC128676.1-201ENST00000454392 318 ntBASIC18.65■□□□□ 0.58
NCLNQ969V3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.65■□□□□ 0.58
NCLNQ969V3 AL031963.3-201ENST00000606441 850 ntBASIC18.65■□□□□ 0.58
NCLNQ969V3 AC073648.6-201ENST00000641589 218 ntBASIC18.65■□□□□ 0.58
NCLNQ969V3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.65■□□□□ 0.58
NCLNQ969V3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.65■□□□□ 0.58
NCLNQ969V3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCLNQ969V3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCLNQ969V3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCLNQ969V3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCLNQ969V3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCLNQ969V3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
NCLNQ969V3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NCLNQ969V3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.64■□□□□ 0.58
NCLNQ969V3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCLNQ969V3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.64■□□□□ 0.57
NCLNQ969V3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.64■□□□□ 0.57
NCLNQ969V3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NCLNQ969V3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.64■□□□□ 0.57
NCLNQ969V3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NCLNQ969V3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NCLNQ969V3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 HLA-G-202ENST00000376815 851 ntBASIC18.64■□□□□ 0.57
NCLNQ969V3 HLA-G-203ENST00000376818 1127 ntBASIC18.64■□□□□ 0.57
NCLNQ969V3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 KRT17P3-201ENST00000420566 1262 ntBASIC18.64■□□□□ 0.57
NCLNQ969V3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.64■□□□□ 0.57
NCLNQ969V3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.64■□□□□ 0.57
NCLNQ969V3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.64■□□□□ 0.57
NCLNQ969V3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.64■□□□□ 0.57
NCLNQ969V3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.64■□□□□ 0.57
NCLNQ969V3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.64■□□□□ 0.57
NCLNQ969V3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.64■□□□□ 0.57
NCLNQ969V3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 KRT8P20-201ENST00000423953 1409 ntBASIC18.64■□□□□ 0.57
NCLNQ969V3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCLNQ969V3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NCLNQ969V3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.64■□□□□ 0.57
NCLNQ969V3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLNQ969V3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NCLNQ969V3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLNQ969V3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
NCLNQ969V3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCLNQ969V3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
NCLNQ969V3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCLNQ969V3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLNQ969V3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLNQ969V3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCLNQ969V3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCLNQ969V3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NCLNQ969V3 POM121L13P-201ENST00000422362 380 ntBASIC18.63■□□□□ 0.57
NCLNQ969V3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.63■□□□□ 0.57
NCLNQ969V3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NCLNQ969V3 AC120498.8-201ENST00000614275 531 ntBASIC18.63■□□□□ 0.57
NCLNQ969V3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
NCLNQ969V3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.63■□□□□ 0.57
NCLNQ969V3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms