Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPGRQ92834 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RPGRQ92834 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.76■■□□□ 1.39
RPGRQ92834 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.76■■□□□ 1.39
RPGRQ92834 MIR4674-201ENST00000582457 87 ntBASIC23.76■■□□□ 1.39
RPGRQ92834 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPGRQ92834 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RPGRQ92834 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPGRQ92834 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
RPGRQ92834 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
RPGRQ92834 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPGRQ92834 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.76■■□□□ 1.39
RPGRQ92834 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPGRQ92834 AC073314.1-201ENST00000568729 2216 ntBASIC23.76■■□□□ 1.39
RPGRQ92834 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RPGRQ92834 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RPGRQ92834 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPGRQ92834 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPGRQ92834 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPGRQ92834 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RPGRQ92834 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.75■■□□□ 1.39
RPGRQ92834 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.75■■□□□ 1.39
RPGRQ92834 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RPGRQ92834 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.75■■□□□ 1.39
RPGRQ92834 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RPGRQ92834 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPGRQ92834 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPGRQ92834 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.75■■□□□ 1.39
RPGRQ92834 AC026396.1-201ENST00000419388 421 ntBASIC23.75■■□□□ 1.39
RPGRQ92834 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.75■■□□□ 1.39
RPGRQ92834 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RPGRQ92834 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.75■■□□□ 1.39
RPGRQ92834 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.75■■□□□ 1.39
RPGRQ92834 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.75■■□□□ 1.39
RPGRQ92834 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
RPGRQ92834 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RPGRQ92834 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RPGRQ92834 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RPGRQ92834 AL512408.1-201ENST00000569378 2000 ntBASIC23.74■■□□□ 1.39
RPGRQ92834 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RPGRQ92834 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.74■■□□□ 1.39
RPGRQ92834 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
RPGRQ92834 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.74■■□□□ 1.39
RPGRQ92834 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.74■■□□□ 1.39
RPGRQ92834 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.74■■□□□ 1.39
RPGRQ92834 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RPGRQ92834 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RPGRQ92834 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPGRQ92834 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.74■■□□□ 1.39
RPGRQ92834 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RPGRQ92834 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.73■■□□□ 1.39
RPGRQ92834 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.73■■□□□ 1.39
RPGRQ92834 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RPGRQ92834 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.73■■□□□ 1.39
RPGRQ92834 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPGRQ92834 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RPGRQ92834 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.72■■□□□ 1.39
RPGRQ92834 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RPGRQ92834 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 CR769767.2-201ENST00000622735 460 ntBASIC23.72■■□□□ 1.39
RPGRQ92834 AC012313.10-201ENST00000623509 926 ntBASIC23.72■■□□□ 1.39
RPGRQ92834 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.72■■□□□ 1.39
RPGRQ92834 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.72■■□□□ 1.39
RPGRQ92834 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPGRQ92834 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RPGRQ92834 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.71■■□□□ 1.39
RPGRQ92834 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.71■■□□□ 1.39
RPGRQ92834 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 AP005212.1-201ENST00000581547 1997 ntBASIC23.71■■□□□ 1.39
RPGRQ92834 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
RPGRQ92834 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms