Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 NIFKP9-201ENST00000419265 221 ntBASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 GCSHP5-201ENST00000443090 522 ntBASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 KSR1P1-201ENST00000446298 240 ntBASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 AL445675.2-201ENST00000620291 557 ntBASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 TMEM191A-211ENST00000637163 1067 ntBASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.38■□□□□ 0.53
SRFBP1Q8NEF9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 AL032819.2-201ENST00000624543 2162 ntBASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SRFBP1Q8NEF9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 AL158047.1-201ENST00000445918 881 ntBASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 AC131212.4-201ENST00000623606 975 ntBASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRFBP1Q8NEF9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SRFBP1Q8NEF9 AC098590.1-201ENST00000468126 897 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms