Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 AC004951.3-201ENST00000418645 1148 ntBASIC20.86■□□□□ 0.93
VPS52Q8N1B4 AC008040.2-201ENST00000461049 708 ntBASIC20.86■□□□□ 0.93
VPS52Q8N1B4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS52Q8N1B4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS52Q8N1B4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.84■□□□□ 0.93
VPS52Q8N1B4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS52Q8N1B4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 MFAP1P1-201ENST00000442257 1255 ntBASIC20.83■□□□□ 0.93
VPS52Q8N1B4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS52Q8N1B4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VPS52Q8N1B4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VPS52Q8N1B4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VPS52Q8N1B4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.83■□□□□ 0.92
VPS52Q8N1B4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VPS52Q8N1B4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VPS52Q8N1B4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
VPS52Q8N1B4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS52Q8N1B4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS52Q8N1B4 TMEM179-206ENST00000616017 1645 ntBASIC20.82■□□□□ 0.92
VPS52Q8N1B4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms