Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 AC006058.3-201ENST00000606217 1069 ntBASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.06■□□□□ 0.64
CPNE9Q8IYJ1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 KRASP1-201ENST00000407852 552 ntBASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 AC239809.2-201ENST00000415381 517 ntBASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 AC073648.6-201ENST00000641589 218 ntBASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 LETM1P2-201ENST00000597330 2178 ntBASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CPNE9Q8IYJ1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 LINC01465-201ENST00000408887 1940 ntBASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 AC004408.2-201ENST00000623613 2777 ntBASIC19.04■□□□□ 0.64
CPNE9Q8IYJ1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE9Q8IYJ1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms