Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 AC097658.1-201ENST00000475555 843 ntBASIC17.74■□□□□ 0.43
TUBA1AQ71U36 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 MYC-209ENST00000641252 345 ntBASIC17.74■□□□□ 0.43
TUBA1AQ71U36 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 AP000997.3-201ENST00000623333 2250 ntBASIC17.74■□□□□ 0.43
TUBA1AQ71U36 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBA1AQ71U36 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 AL356309.3-201ENST00000624132 1934 ntBASIC17.73■□□□□ 0.43
TUBA1AQ71U36 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
TUBA1AQ71U36 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 AC073210.2-201ENST00000430369 194 ntBASIC17.72■□□□□ 0.43
TUBA1AQ71U36 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBA1AQ71U36 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 AC104581.1-202ENST00000635932 2618 ntBASIC17.71■□□□□ 0.43
TUBA1AQ71U36 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 RNA5SP413-201ENST00000516373 109 ntBASIC17.71■□□□□ 0.43
TUBA1AQ71U36 C2orf69P4-201ENST00000565394 541 ntBASIC17.71■□□□□ 0.43
TUBA1AQ71U36 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.71■□□□□ 0.43
TUBA1AQ71U36 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms