Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 AP002982.1-201ENST00000492365 877 ntBASIC18.05■□□□□ 0.48
RTL4Q6ZR62 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 AC113410.3-201ENST00000623366 203 ntBASIC18.05■□□□□ 0.48
RTL4Q6ZR62 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 AC116562.4-201ENST00000641316 2276 ntBASIC18.05■□□□□ 0.48
RTL4Q6ZR62 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTL4Q6ZR62 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 AP001271.2-201ENST00000624018 1556 ntBASIC18.04■□□□□ 0.48
RTL4Q6ZR62 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.04■□□□□ 0.48
RTL4Q6ZR62 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 KRT17P2-201ENST00000300992 1314 ntBASIC18.03■□□□□ 0.48
RTL4Q6ZR62 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 TUBB8P6-201ENST00000436895 1288 ntBASIC18.03■□□□□ 0.48
RTL4Q6ZR62 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 AC073195.1-201ENST00000607241 877 ntBASIC18.03■□□□□ 0.48
RTL4Q6ZR62 AL353708.3-201ENST00000610272 989 ntBASIC18.03■□□□□ 0.48
RTL4Q6ZR62 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RTL4Q6ZR62 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.02■□□□□ 0.48
RTL4Q6ZR62 TSPY7P-201ENST00000431358 1114 ntBASIC18.02■□□□□ 0.48
RTL4Q6ZR62 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 KRT18P16-201ENST00000510337 1294 ntBASIC18.02■□□□□ 0.48
RTL4Q6ZR62 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 MIR4785-201ENST00000585005 73 ntBASIC18.02■□□□□ 0.48
RTL4Q6ZR62 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.02■□□□□ 0.48
RTL4Q6ZR62 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.02■□□□□ 0.47
RTL4Q6ZR62 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.02■□□□□ 0.47
RTL4Q6ZR62 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.02■□□□□ 0.47
RTL4Q6ZR62 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms