Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 DSTNP1-201ENST00000419906 465 ntBASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC092810.1-201ENST00000429208 1224 ntBASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AP002981.1-201ENST00000517692 975 ntBASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC005412.1-201ENST00000580812 1049 ntBASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC009269.6-201ENST00000621778 588 ntBASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4R3CPQ6ZMV5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 AL391422.3-201ENST00000603791 2761 ntBASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 AL445984.1-201ENST00000637834 659 ntBASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PPP4R3CPQ6ZMV5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC112907.3-201ENST00000577781 2400 ntBASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC098590.1-201ENST00000468126 897 ntBASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 PTBP1P-201ENST00000554374 1601 ntBASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3CPQ6ZMV5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 POM121L13P-201ENST00000422362 380 ntBASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 AP000949.1-201ENST00000438328 629 ntBASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 AL360268.1-201ENST00000453870 765 ntTSL 3 BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC22.08■■□□□ 1.13
PPP4R3CPQ6ZMV5 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms