Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 RPS2P4-201ENST00000476944 856 ntBASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DQA1Q5Y7H0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC131212.4-201ENST00000623606 975 ntBASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 CR392000.1-201ENST00000624770 1228 ntBASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 TREX1-205ENST00000625293 1783 ntBASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC125437.2-201ENST00000625180 2167 ntBASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DQA1Q5Y7H0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC233702.5-201ENST00000584107 538 ntBASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 KRT16P1-201ENST00000399124 1418 ntBASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DQA1Q5Y7H0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC093827.2-201ENST00000512654 315 ntBASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 Z99916.2-201ENST00000604037 246 ntBASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.96■□□□□ 0.47
HLA-DQA1Q5Y7H0 AL445675.2-201ENST00000620291 557 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms