Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 AC137761.2-201ENST00000561729 223 ntBASIC15.28■□□□□ 0.04
FAM78BQ5VT40 AC145350.3-201ENST00000569033 163 ntBASIC15.28■□□□□ 0.04
FAM78BQ5VT40 AL591742.1-201ENST00000604433 565 ntBASIC15.28■□□□□ 0.04
FAM78BQ5VT40 MYCNOS-205ENST00000641950 531 ntBASIC15.28■□□□□ 0.04
FAM78BQ5VT40 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 HLA-G-202ENST00000376815 851 ntBASIC15.27■□□□□ 0.04
FAM78BQ5VT40 HLA-G-203ENST00000376818 1127 ntBASIC15.27■□□□□ 0.04
FAM78BQ5VT40 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.27■□□□□ 0.04
FAM78BQ5VT40 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 PHGDH-210ENST00000641115 1638 ntBASIC15.27■□□□□ 0.03
FAM78BQ5VT40 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM78BQ5VT40 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM78BQ5VT40 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 AL161938.1-201ENST00000569833 2180 ntBASIC15.25■□□□□ 0.03
FAM78BQ5VT40 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.25■□□□□ 0.03
FAM78BQ5VT40 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms