Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.7□□□□□ -0.22
UBE2D3P61077 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.7□□□□□ -0.22
UBE2D3P61077 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2D3P61077 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
UBE2D3P61077 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
UBE2D3P61077 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBE2D3P61077 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D3P61077 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBE2D3P61077 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBE2D3P61077 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2D3P61077 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 LINC01465-201ENST00000408887 1940 ntBASIC13.69□□□□□ -0.22
UBE2D3P61077 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 AC083906.2-201ENST00000511578 360 ntBASIC13.69□□□□□ -0.22
UBE2D3P61077 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
UBE2D3P61077 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBE2D3P61077 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D3P61077 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBE2D3P61077 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2D3P61077 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UBE2D3P61077 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2D3P61077 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBE2D3P61077 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2D3P61077 AC091874.3-201ENST00000512672 1195 ntBASIC13.68□□□□□ -0.22
UBE2D3P61077 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.68□□□□□ -0.22
UBE2D3P61077 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.68□□□□□ -0.22
UBE2D3P61077 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2D3P61077 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2D3P61077 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
UBE2D3P61077 AL133373.2-201ENST00000623187 2828 ntBASIC13.68□□□□□ -0.22
UBE2D3P61077 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBE2D3P61077 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UBE2D3P61077 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
UBE2D3P61077 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D3P61077 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBE2D3P61077 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D3P61077 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2D3P61077 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBE2D3P61077 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D3P61077 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D3P61077 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D3P61077 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D3P61077 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D3P61077 SLC29A4P1-201ENST00000398760 971 ntBASIC13.67□□□□□ -0.22
UBE2D3P61077 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms