Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLDN12P56749 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN12P56749 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN12P56749 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.75■□□□□ 0.27
CLDN12P56749 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN12P56749 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 CYP2T3P-201ENST00000601990 817 ntBASIC16.75■□□□□ 0.27
CLDN12P56749 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.75■□□□□ 0.27
CLDN12P56749 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN12P56749 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN12P56749 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN12P56749 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CLDN12P56749 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLDN12P56749 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN12P56749 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN12P56749 AC023632.3-201ENST00000521633 145 ntBASIC16.74■□□□□ 0.27
CLDN12P56749 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN12P56749 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN12P56749 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN12P56749 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN12P56749 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLDN12P56749 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN12P56749 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 ZNF815P-204ENST00000434898 1737 ntBASIC16.73■□□□□ 0.27
CLDN12P56749 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLDN12P56749 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN12P56749 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CLDN12P56749 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.73■□□□□ 0.27
CLDN12P56749 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN12P56749 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN12P56749 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN12P56749 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 AC068338.2-201ENST00000563278 1430 ntBASIC16.72■□□□□ 0.27
CLDN12P56749 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN12P56749 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN12P56749 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CLDN12P56749 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN12P56749 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLDN12P56749 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN12P56749 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN12P56749 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN12P56749 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms