Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDE1AP54750 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.55■■□□□ 1.36
PDE1AP54750 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDE1AP54750 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.55■■□□□ 1.36
PDE1AP54750 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.55■■□□□ 1.36
PDE1AP54750 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PDE1AP54750 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE1AP54750 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE1AP54750 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE1AP54750 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.55■■□□□ 1.36
PDE1AP54750 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE1AP54750 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE1AP54750 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE1AP54750 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.54■■□□□ 1.36
PDE1AP54750 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
PDE1AP54750 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 NIFKP9-201ENST00000419265 221 ntBASIC23.54■■□□□ 1.36
PDE1AP54750 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 Z85996.1-201ENST00000494644 937 ntBASIC23.54■■□□□ 1.36
PDE1AP54750 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.54■■□□□ 1.36
PDE1AP54750 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 AL353708.3-201ENST00000610272 989 ntBASIC23.54■■□□□ 1.36
PDE1AP54750 AL445675.2-201ENST00000620291 557 ntBASIC23.54■■□□□ 1.36
PDE1AP54750 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.54■■□□□ 1.36
PDE1AP54750 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.54■■□□□ 1.36
PDE1AP54750 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE1AP54750 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.54■■□□□ 1.36
PDE1AP54750 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.54■■□□□ 1.36
PDE1AP54750 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PDE1AP54750 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PDE1AP54750 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PDE1AP54750 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.53■■□□□ 1.36
PDE1AP54750 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDE1AP54750 FP475955.4-201ENST00000623131 1990 ntBASIC23.53■■□□□ 1.36
PDE1AP54750 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDE1AP54750 ABHD17AP1-201ENST00000358206 933 ntBASIC23.53■■□□□ 1.36
PDE1AP54750 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.53■■□□□ 1.36
PDE1AP54750 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.53■■□□□ 1.36
PDE1AP54750 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.53■■□□□ 1.36
PDE1AP54750 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.53■■□□□ 1.36
PDE1AP54750 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.53■■□□□ 1.36
PDE1AP54750 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.53■■□□□ 1.36
PDE1AP54750 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDE1AP54750 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDE1AP54750 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE1AP54750 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE1AP54750 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PDE1AP54750 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE1AP54750 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.52■■□□□ 1.36
PDE1AP54750 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PDE1AP54750 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
PDE1AP54750 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PDE1AP54750 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.52■■□□□ 1.36
PDE1AP54750 RPS2P4-201ENST00000476944 856 ntBASIC23.52■■□□□ 1.36
PDE1AP54750 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.52■■□□□ 1.36
PDE1AP54750 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
PDE1AP54750 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PDE1AP54750 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE1AP54750 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.52■■□□□ 1.36
PDE1AP54750 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.52■■□□□ 1.36
PDE1AP54750 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDE1AP54750 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
PDE1AP54750 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.51■■□□□ 1.35
PDE1AP54750 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PDE1AP54750 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PDE1AP54750 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.51■■□□□ 1.35
PDE1AP54750 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.51■■□□□ 1.35
PDE1AP54750 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.51■■□□□ 1.35
PDE1AP54750 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.51■■□□□ 1.35
PDE1AP54750 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDE1AP54750 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.51■■□□□ 1.35
PDE1AP54750 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDE1AP54750 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE1AP54750 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.5■■□□□ 1.35
PDE1AP54750 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.5■■□□□ 1.35
PDE1AP54750 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDE1AP54750 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDE1AP54750 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.5■■□□□ 1.35
PDE1AP54750 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE1AP54750 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE1AP54750 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDE1AP54750 AC004980.1-204ENST00000429707 299 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms