Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.25■□□□□ 0.99
ATN1P54259 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.25■□□□□ 0.99
ATN1P54259 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.25■□□□□ 0.99
ATN1P54259 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.25■□□□□ 0.99
ATN1P54259 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.25■□□□□ 0.99
ATN1P54259 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.25■□□□□ 0.99
ATN1P54259 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ATN1P54259 AP002414.4-201ENST00000589764 1148 ntBASIC21.25■□□□□ 0.99
ATN1P54259 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
ATN1P54259 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.25■□□□□ 0.99
ATN1P54259 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.25■□□□□ 0.99
ATN1P54259 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.25■□□□□ 0.99
ATN1P54259 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATN1P54259 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.24■□□□□ 0.99
ATN1P54259 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.24■□□□□ 0.99
ATN1P54259 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.24■□□□□ 0.99
ATN1P54259 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.24■□□□□ 0.99
ATN1P54259 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.24■□□□□ 0.99
ATN1P54259 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.24■□□□□ 0.99
ATN1P54259 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.24■□□□□ 0.99
ATN1P54259 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATN1P54259 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.24■□□□□ 0.99
ATN1P54259 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.24■□□□□ 0.99
ATN1P54259 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATN1P54259 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.24■□□□□ 0.99
ATN1P54259 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ATN1P54259 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATN1P54259 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.23■□□□□ 0.99
ATN1P54259 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ATN1P54259 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.23■□□□□ 0.99
ATN1P54259 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.23■□□□□ 0.99
ATN1P54259 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.23■□□□□ 0.99
ATN1P54259 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.23■□□□□ 0.99
ATN1P54259 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 AL732292.2-201ENST00000609649 430 ntBASIC21.23■□□□□ 0.99
ATN1P54259 AL031008.1-201ENST00000619963 541 ntBASIC21.23■□□□□ 0.99
ATN1P54259 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ATN1P54259 AL117328.2-201ENST00000624617 1940 ntBASIC21.23■□□□□ 0.99
ATN1P54259 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.23■□□□□ 0.99
ATN1P54259 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATN1P54259 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ATN1P54259 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.22■□□□□ 0.99
ATN1P54259 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.22■□□□□ 0.99
ATN1P54259 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ATN1P54259 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 AC034232.1-201ENST00000506026 1064 ntBASIC21.22■□□□□ 0.99
ATN1P54259 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.22■□□□□ 0.99
ATN1P54259 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.22■□□□□ 0.99
ATN1P54259 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.22■□□□□ 0.99
ATN1P54259 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.22■□□□□ 0.99
ATN1P54259 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.22■□□□□ 0.99
ATN1P54259 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.22■□□□□ 0.99
ATN1P54259 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATN1P54259 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ATN1P54259 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.21■□□□□ 0.99
ATN1P54259 FEM1AP1-201ENST00000431297 1995 ntBASIC21.21■□□□□ 0.99
ATN1P54259 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ATN1P54259 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATN1P54259 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ATN1P54259 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATN1P54259 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATN1P54259 AP000593.1-201ENST00000393668 712 ntBASIC21.21■□□□□ 0.99
ATN1P54259 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATN1P54259 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.21■□□□□ 0.99
ATN1P54259 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.21■□□□□ 0.99
ATN1P54259 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ATN1P54259 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.21■□□□□ 0.99
ATN1P54259 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms