Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
UBE2AP49459 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
UBE2AP49459 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UBE2AP49459 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 AC026471.1-201ENST00000564629 3026 ntBASIC12.21□□□□□ -0.45
UBE2AP49459 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
UBE2AP49459 GPX1P1-201ENST00000388829 606 ntBASIC12.21□□□□□ -0.45
UBE2AP49459 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2AP49459 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.21□□□□□ -0.45
UBE2AP49459 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2AP49459 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.21□□□□□ -0.45
UBE2AP49459 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.21□□□□□ -0.45
UBE2AP49459 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2AP49459 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UBE2AP49459 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2AP49459 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.21□□□□□ -0.45
UBE2AP49459 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.21□□□□□ -0.45
UBE2AP49459 AL050303.2-201ENST00000619798 666 ntBASIC12.21□□□□□ -0.45
UBE2AP49459 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.21□□□□□ -0.45
UBE2AP49459 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
UBE2AP49459 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBE2AP49459 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
UBE2AP49459 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC12.21□□□□□ -0.46
UBE2AP49459 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2AP49459 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2AP49459 AC116562.4-201ENST00000641316 2276 ntBASIC12.21□□□□□ -0.46
UBE2AP49459 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2AP49459 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBE2AP49459 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
UBE2AP49459 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UBE2AP49459 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2AP49459 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UBE2AP49459 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.2□□□□□ -0.46
UBE2AP49459 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.2□□□□□ -0.46
UBE2AP49459 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2AP49459 MIPEPP3-201ENST00000412105 444 ntBASIC12.2□□□□□ -0.46
UBE2AP49459 DUSP5P2-201ENST00000426873 1033 ntBASIC12.2□□□□□ -0.46
UBE2AP49459 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
UBE2AP49459 CROCCP5-201ENST00000436658 830 ntBASIC12.2□□□□□ -0.46
UBE2AP49459 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.2□□□□□ -0.46
UBE2AP49459 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 MIR4758-201ENST00000577688 71 ntBASIC12.2□□□□□ -0.46
UBE2AP49459 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2AP49459 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.2□□□□□ -0.46
UBE2AP49459 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
UBE2AP49459 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBE2AP49459 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
UBE2AP49459 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
UBE2AP49459 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2AP49459 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2AP49459 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
UBE2AP49459 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.19□□□□□ -0.46
UBE2AP49459 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2AP49459 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms