Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SRP9P49458 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SRP9P49458 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SRP9P49458 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.06■□□□□ 0.32
SRP9P49458 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.06■□□□□ 0.32
SRP9P49458 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.06■□□□□ 0.32
SRP9P49458 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.06■□□□□ 0.32
SRP9P49458 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SRP9P49458 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SRP9P49458 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.06■□□□□ 0.32
SRP9P49458 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.06■□□□□ 0.32
SRP9P49458 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SRP9P49458 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
SRP9P49458 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SRP9P49458 AC092368.3-202ENST00000574180 1591 ntBASIC17.06■□□□□ 0.32
SRP9P49458 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.05■□□□□ 0.32
SRP9P49458 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.05■□□□□ 0.32
SRP9P49458 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SRP9P49458 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.05■□□□□ 0.32
SRP9P49458 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.05■□□□□ 0.32
SRP9P49458 AL390961.4-201ENST00000623958 2535 ntBASIC17.05■□□□□ 0.32
SRP9P49458 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SRP9P49458 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.05■□□□□ 0.32
SRP9P49458 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.05■□□□□ 0.32
SRP9P49458 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.05■□□□□ 0.32
SRP9P49458 KRT18P6-201ENST00000555540 1265 ntBASIC17.05■□□□□ 0.32
SRP9P49458 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.05■□□□□ 0.32
SRP9P49458 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.05■□□□□ 0.32
SRP9P49458 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SRP9P49458 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.05■□□□□ 0.32
SRP9P49458 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.05■□□□□ 0.32
SRP9P49458 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRP9P49458 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.05■□□□□ 0.32
SRP9P49458 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.04■□□□□ 0.32
SRP9P49458 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 RNA5SP413-201ENST00000516373 109 ntBASIC17.04■□□□□ 0.32
SRP9P49458 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.04■□□□□ 0.32
SRP9P49458 AL031963.3-201ENST00000606441 850 ntBASIC17.04■□□□□ 0.32
SRP9P49458 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.04■□□□□ 0.32
SRP9P49458 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.04■□□□□ 0.32
SRP9P49458 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.04■□□□□ 0.32
SRP9P49458 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.04■□□□□ 0.32
SRP9P49458 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 KRT8P20-201ENST00000423953 1409 ntBASIC17.04■□□□□ 0.32
SRP9P49458 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SRP9P49458 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRP9P49458 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.04■□□□□ 0.32
SRP9P49458 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SRP9P49458 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRP9P49458 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRP9P49458 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRP9P49458 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SRP9P49458 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRP9P49458 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SRP9P49458 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRP9P49458 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRP9P49458 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SRP9P49458 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SRP9P49458 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRP9P49458 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRP9P49458 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms