Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC6A12P48065 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SLC6A12P48065 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A12P48065 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC6A12P48065 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.61■□□□□ 0.57
SLC6A12P48065 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 AL353708.3-201ENST00000610272 989 ntBASIC18.61■□□□□ 0.57
SLC6A12P48065 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC6A12P48065 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A12P48065 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 KRT8P41-201ENST00000533985 1514 ntBASIC18.6■□□□□ 0.57
SLC6A12P48065 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A12P48065 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A12P48065 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 NIFKP9-201ENST00000419265 221 ntBASIC18.6■□□□□ 0.57
SLC6A12P48065 Z85996.1-201ENST00000494644 937 ntBASIC18.6■□□□□ 0.57
SLC6A12P48065 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC6A12P48065 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A12P48065 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 AL359736.2-201ENST00000621992 437 ntBASIC18.6■□□□□ 0.57
SLC6A12P48065 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SLC6A12P48065 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A12P48065 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A12P48065 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.6■□□□□ 0.57
SLC6A12P48065 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A12P48065 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A12P48065 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A12P48065 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A12P48065 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
SLC6A12P48065 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A12P48065 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A12P48065 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A12P48065 HTR7P1-201ENST00000538670 1336 ntBASIC18.59■□□□□ 0.57
SLC6A12P48065 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC6A12P48065 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A12P48065 TSPY21P-201ENST00000433481 731 ntBASIC18.59■□□□□ 0.57
SLC6A12P48065 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.59■□□□□ 0.57
SLC6A12P48065 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A12P48065 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SLC6A12P48065 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC6A12P48065 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SLC6A12P48065 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A12P48065 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A12P48065 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A12P48065 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A12P48065 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A12P48065 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A12P48065 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A12P48065 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A12P48065 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A12P48065 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A12P48065 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.58■□□□□ 0.57
SLC6A12P48065 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SLC6A12P48065 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A12P48065 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A12P48065 FEM1AP3-201ENST00000403722 1741 ntBASIC18.58■□□□□ 0.57
SLC6A12P48065 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A12P48065 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A12P48065 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC6A12P48065 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC6A12P48065 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 KRT18P29-201ENST00000397031 1267 ntBASIC18.58■□□□□ 0.56
SLC6A12P48065 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SLC6A12P48065 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC6A12P48065 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC6A12P48065 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC6A12P48065 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC6A12P48065 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
SLC6A12P48065 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms