Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2CP42773 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2CP42773 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKN2CP42773 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2CP42773 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDKN2CP42773 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2CP42773 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDKN2CP42773 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2CP42773 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2CP42773 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKN2CP42773 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKN2CP42773 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKN2CP42773 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKN2CP42773 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKN2CP42773 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKN2CP42773 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.21■□□□□ 0.51
CDKN2CP42773 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 AC083880.1-201ENST00000608266 535 ntBASIC18.21■□□□□ 0.51
CDKN2CP42773 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKN2CP42773 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKN2CP42773 IRX1P1-201ENST00000438849 1838 ntBASIC18.21■□□□□ 0.51
CDKN2CP42773 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDKN2CP42773 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.2■□□□□ 0.5
CDKN2CP42773 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2CP42773 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2CP42773 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2CP42773 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2CP42773 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 AL138781.1-201ENST00000566567 1274 ntBASIC18.2■□□□□ 0.5
CDKN2CP42773 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKN2CP42773 AC060766.5-201ENST00000590539 871 ntBASIC18.2■□□□□ 0.5
CDKN2CP42773 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2CP42773 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKN2CP42773 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.2■□□□□ 0.5
CDKN2CP42773 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2CP42773 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDKN2CP42773 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2CP42773 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKN2CP42773 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2CP42773 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CDKN2CP42773 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 AC009113.1-201ENST00000570267 2443 ntBASIC18.19■□□□□ 0.5
CDKN2CP42773 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDKN2CP42773 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2CP42773 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKN2CP42773 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKN2CP42773 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.19■□□□□ 0.5
CDKN2CP42773 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKN2CP42773 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKN2CP42773 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKN2CP42773 AC120498.8-201ENST00000614275 531 ntBASIC18.19■□□□□ 0.5
CDKN2CP42773 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2CP42773 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKN2CP42773 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDKN2CP42773 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKN2CP42773 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2CP42773 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKN2CP42773 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKN2CP42773 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2CP42773 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2CP42773 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms