Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HADHAP40939 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 RN7SL471P-201ENST00000580476 299 ntBASIC19.48■□□□□ 0.71
HADHAP40939 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.48■□□□□ 0.71
HADHAP40939 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.48■□□□□ 0.71
HADHAP40939 AL023875.1-201ENST00000640777 796 ntBASIC19.48■□□□□ 0.71
HADHAP40939 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.48■□□□□ 0.71
HADHAP40939 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HADHAP40939 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.48■□□□□ 0.71
HADHAP40939 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.48■□□□□ 0.71
HADHAP40939 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HADHAP40939 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.47■□□□□ 0.71
HADHAP40939 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.47■□□□□ 0.71
HADHAP40939 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.47■□□□□ 0.71
HADHAP40939 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.47■□□□□ 0.71
HADHAP40939 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
HADHAP40939 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HADHAP40939 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.47■□□□□ 0.71
HADHAP40939 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.47■□□□□ 0.71
HADHAP40939 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.47■□□□□ 0.71
HADHAP40939 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HADHAP40939 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.47■□□□□ 0.71
HADHAP40939 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HADHAP40939 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.47■□□□□ 0.71
HADHAP40939 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HADHAP40939 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HADHAP40939 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HADHAP40939 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.46■□□□□ 0.71
HADHAP40939 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.46■□□□□ 0.71
HADHAP40939 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
HADHAP40939 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HADHAP40939 KRASP1-201ENST00000407852 552 ntBASIC19.46■□□□□ 0.71
HADHAP40939 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HADHAP40939 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 AC133681.1-201ENST00000465482 601 ntBASIC19.46■□□□□ 0.71
HADHAP40939 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HADHAP40939 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HADHAP40939 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.46■□□□□ 0.71
HADHAP40939 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HADHAP40939 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
HADHAP40939 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HADHAP40939 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HADHAP40939 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.45■□□□□ 0.7
HADHAP40939 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.45■□□□□ 0.7
HADHAP40939 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.45■□□□□ 0.7
HADHAP40939 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.45■□□□□ 0.7
HADHAP40939 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.45■□□□□ 0.7
HADHAP40939 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.45■□□□□ 0.7
HADHAP40939 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.45■□□□□ 0.7
HADHAP40939 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HADHAP40939 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.45■□□□□ 0.7
HADHAP40939 ITM2C-210ENST00000620962 501 ntBASIC19.45■□□□□ 0.7
HADHAP40939 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms