Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.08■□□□□ 0.97
HOXC8P31273 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.08■□□□□ 0.97
HOXC8P31273 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.08■□□□□ 0.97
HOXC8P31273 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.08■□□□□ 0.97
HOXC8P31273 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HOXC8P31273 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC8P31273 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC8P31273 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC8P31273 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC8P31273 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC8P31273 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC8P31273 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.08■□□□□ 0.96
HOXC8P31273 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HOXC8P31273 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXC8P31273 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
HOXC8P31273 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.07■□□□□ 0.96
HOXC8P31273 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXC8P31273 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
HOXC8P31273 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXC8P31273 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.07■□□□□ 0.96
HOXC8P31273 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXC8P31273 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXC8P31273 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HOXC8P31273 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 SPDYE15P-201ENST00000424157 909 ntBASIC21.06■□□□□ 0.96
HOXC8P31273 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.06■□□□□ 0.96
HOXC8P31273 AC112907.2-201ENST00000448639 330 ntBASIC21.06■□□□□ 0.96
HOXC8P31273 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
HOXC8P31273 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.06■□□□□ 0.96
HOXC8P31273 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.06■□□□□ 0.96
HOXC8P31273 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HOXC8P31273 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HOXC8P31273 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
HOXC8P31273 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
HOXC8P31273 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXC8P31273 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.05■□□□□ 0.96
HOXC8P31273 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.05■□□□□ 0.96
HOXC8P31273 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HOXC8P31273 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXC8P31273 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXC8P31273 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 SPDYE13P-201ENST00000445314 798 ntBASIC21.05■□□□□ 0.96
HOXC8P31273 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.05■□□□□ 0.96
HOXC8P31273 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXC8P31273 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXC8P31273 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXC8P31273 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.05■□□□□ 0.96
HOXC8P31273 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.05■□□□□ 0.96
HOXC8P31273 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXC8P31273 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXC8P31273 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC8P31273 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXC8P31273 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
HOXC8P31273 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
HOXC8P31273 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.04■□□□□ 0.96
HOXC8P31273 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.04■□□□□ 0.96
HOXC8P31273 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms