Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.85■□□□□ 0.45
NR4A1P22736 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NR4A1P22736 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.84■□□□□ 0.45
NR4A1P22736 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.84■□□□□ 0.45
NR4A1P22736 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.84■□□□□ 0.45
NR4A1P22736 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 AL512625.2-201ENST00000417533 625 ntBASIC17.84■□□□□ 0.45
NR4A1P22736 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.84■□□□□ 0.45
NR4A1P22736 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
NR4A1P22736 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NR4A1P22736 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
NR4A1P22736 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.84■□□□□ 0.45
NR4A1P22736 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR4A1P22736 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.84■□□□□ 0.45
NR4A1P22736 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR4A1P22736 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
NR4A1P22736 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.83■□□□□ 0.45
NR4A1P22736 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NR4A1P22736 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
NR4A1P22736 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NR4A1P22736 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR4A1P22736 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR4A1P22736 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NR4A1P22736 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.83■□□□□ 0.44
NR4A1P22736 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.83■□□□□ 0.44
NR4A1P22736 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 TSPY6P-201ENST00000448518 926 ntBASIC17.83■□□□□ 0.44
NR4A1P22736 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.83■□□□□ 0.44
NR4A1P22736 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.83■□□□□ 0.44
NR4A1P22736 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.83■□□□□ 0.44
NR4A1P22736 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NR4A1P22736 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.83■□□□□ 0.44
NR4A1P22736 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.83■□□□□ 0.44
NR4A1P22736 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR4A1P22736 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NR4A1P22736 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NR4A1P22736 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.82■□□□□ 0.44
NR4A1P22736 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NR4A1P22736 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.82■□□□□ 0.44
NR4A1P22736 AC116050.2-201ENST00000612102 1779 ntBASIC17.82■□□□□ 0.44
NR4A1P22736 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 SLC29A4P1-201ENST00000398760 971 ntBASIC17.82■□□□□ 0.44
NR4A1P22736 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 AC007322.3-201ENST00000426526 701 ntBASIC17.82■□□□□ 0.44
NR4A1P22736 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.82■□□□□ 0.44
NR4A1P22736 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.82■□□□□ 0.44
NR4A1P22736 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
NR4A1P22736 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NR4A1P22736 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.82■□□□□ 0.44
NR4A1P22736 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.82■□□□□ 0.44
NR4A1P22736 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.82■□□□□ 0.44
NR4A1P22736 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR4A1P22736 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR4A1P22736 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR4A1P22736 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms