Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RAB3BP20337 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RAB3BP20337 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB3BP20337 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB3BP20337 ZNF815P-204ENST00000434898 1737 ntBASIC16.88■□□□□ 0.29
RAB3BP20337 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 AL512353.2-201ENST00000448759 1962 ntBASIC16.88■□□□□ 0.29
RAB3BP20337 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB3BP20337 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB3BP20337 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 AC023632.3-201ENST00000521633 145 ntBASIC16.88■□□□□ 0.29
RAB3BP20337 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB3BP20337 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.88■□□□□ 0.29
RAB3BP20337 AC142381.2-201ENST00000566120 298 ntBASIC16.88■□□□□ 0.29
RAB3BP20337 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3BP20337 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3BP20337 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3BP20337 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 AC018553.1-201ENST00000616682 1458 ntBASIC16.87■□□□□ 0.29
RAB3BP20337 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3BP20337 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB3BP20337 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3BP20337 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RAB3BP20337 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB3BP20337 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB3BP20337 KRT18P14-201ENST00000534205 1250 ntBASIC16.87■□□□□ 0.29
RAB3BP20337 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB3BP20337 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB3BP20337 AC010536.3-201ENST00000620306 533 ntBASIC16.87■□□□□ 0.29
RAB3BP20337 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB3BP20337 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB3BP20337 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB3BP20337 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB3BP20337 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB3BP20337 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3BP20337 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB3BP20337 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB3BP20337 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB3BP20337 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.86■□□□□ 0.29
RAB3BP20337 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB3BP20337 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.86■□□□□ 0.29
RAB3BP20337 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB3BP20337 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB3BP20337 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB3BP20337 IRX1P1-201ENST00000438849 1838 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms