Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 AL353807.1-201ENST00000427475 662 ntBASIC19.45■□□□□ 0.7
HLA-DPA1P20036 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 AL160286.2-201ENST00000567150 934 ntBASIC19.45■□□□□ 0.7
HLA-DPA1P20036 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 AL353708.3-201ENST00000610272 989 ntBASIC19.45■□□□□ 0.7
HLA-DPA1P20036 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 HTR7P1-201ENST00000538670 1336 ntBASIC19.45■□□□□ 0.7
HLA-DPA1P20036 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 RARRES2P10-201ENST00000564312 460 ntBASIC19.44■□□□□ 0.7
HLA-DPA1P20036 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPA1P20036 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 NIFKP9-201ENST00000419265 221 ntBASIC19.43■□□□□ 0.7
HLA-DPA1P20036 AC098590.1-201ENST00000468126 897 ntBASIC19.43■□□□□ 0.7
HLA-DPA1P20036 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 AC142381.4-202ENST00000563973 229 ntBASIC19.43■□□□□ 0.7
HLA-DPA1P20036 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 AL445675.2-201ENST00000620291 557 ntBASIC19.43■□□□□ 0.7
HLA-DPA1P20036 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DPA1P20036 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 AC141586.3-201ENST00000562166 1838 ntBASIC19.42■□□□□ 0.7
HLA-DPA1P20036 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 GCSHP5-201ENST00000443090 522 ntBASIC19.42■□□□□ 0.7
HLA-DPA1P20036 AP002982.1-201ENST00000492365 877 ntBASIC19.42■□□□□ 0.7
HLA-DPA1P20036 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 LINC01465-201ENST00000408887 1940 ntBASIC19.42■□□□□ 0.7
HLA-DPA1P20036 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 TEX21P-204ENST00000641479 1693 ntBASIC19.42■□□□□ 0.7
HLA-DPA1P20036 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPA1P20036 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms