Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DOBP13765 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HLA-DOBP13765 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DOBP13765 AC133681.1-201ENST00000465482 601 ntBASIC17.27■□□□□ 0.36
HLA-DOBP13765 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HLA-DOBP13765 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DOBP13765 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DOBP13765 C1QL1P1-201ENST00000568105 661 ntBASIC17.27■□□□□ 0.36
HLA-DOBP13765 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HLA-DOBP13765 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOBP13765 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DOBP13765 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HLA-DOBP13765 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.27■□□□□ 0.35
HLA-DOBP13765 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HLA-DOBP13765 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DOBP13765 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HLA-DOBP13765 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.27■□□□□ 0.35
HLA-DOBP13765 AC018445.3-201ENST00000624177 1945 ntBASIC17.27■□□□□ 0.35
HLA-DOBP13765 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DOBP13765 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DOBP13765 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DOBP13765 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DOBP13765 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DOBP13765 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 KRT16P5-201ENST00000455284 522 ntBASIC17.26■□□□□ 0.35
HLA-DOBP13765 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.26■□□□□ 0.35
HLA-DOBP13765 AC110285.5-201ENST00000611501 352 ntBASIC17.26■□□□□ 0.35
HLA-DOBP13765 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HLA-DOBP13765 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DOBP13765 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DOBP13765 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HLA-DOBP13765 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DOBP13765 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 RPPH1-201ENST00000516869 333 ntBASIC17.25■□□□□ 0.35
HLA-DOBP13765 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 ITM2C-210ENST00000620962 501 ntBASIC17.25■□□□□ 0.35
HLA-DOBP13765 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 HLA-A-209ENST00000638375 975 ntBASIC17.25■□□□□ 0.35
HLA-DOBP13765 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DOBP13765 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DOBP13765 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 KRT18P29-201ENST00000397031 1267 ntBASIC17.24■□□□□ 0.35
HLA-DOBP13765 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms