Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.98■□□□□ 0.63
RBP1P09455 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.98■□□□□ 0.63
RBP1P09455 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RBP1P09455 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.98■□□□□ 0.63
RBP1P09455 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
RBP1P09455 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.98■□□□□ 0.63
RBP1P09455 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.98■□□□□ 0.63
RBP1P09455 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.98■□□□□ 0.63
RBP1P09455 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RBP1P09455 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.98■□□□□ 0.63
RBP1P09455 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBP1P09455 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RBP1P09455 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 FP475955.4-201ENST00000623131 1990 ntBASIC18.97■□□□□ 0.63
RBP1P09455 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RBP1P09455 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RBP1P09455 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.96■□□□□ 0.63
RBP1P09455 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 MIR935-201ENST00000401179 91 ntBASIC18.96■□□□□ 0.63
RBP1P09455 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.96■□□□□ 0.63
RBP1P09455 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.96■□□□□ 0.63
RBP1P09455 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
RBP1P09455 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RBP1P09455 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RBP1P09455 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.96■□□□□ 0.63
RBP1P09455 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBP1P09455 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.96■□□□□ 0.63
RBP1P09455 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RBP1P09455 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.95■□□□□ 0.62
RBP1P09455 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RBP1P09455 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RBP1P09455 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
RBP1P09455 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms