Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.99■□□□□ 0.47
PDGFAP04085 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.99■□□□□ 0.47
PDGFAP04085 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.99■□□□□ 0.47
PDGFAP04085 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.99■□□□□ 0.47
PDGFAP04085 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.99■□□□□ 0.47
PDGFAP04085 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.99■□□□□ 0.47
PDGFAP04085 AL138966.2-201ENST00000621997 464 ntBASIC17.99■□□□□ 0.47
PDGFAP04085 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PDGFAP04085 FEM1AP4-201ENST00000443167 1987 ntBASIC17.99■□□□□ 0.47
PDGFAP04085 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PDGFAP04085 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PDGFAP04085 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFAP04085 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFAP04085 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFAP04085 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFAP04085 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFAP04085 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFAP04085 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFAP04085 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFAP04085 AC011298.2-201ENST00000617989 482 ntBASIC17.98■□□□□ 0.47
PDGFAP04085 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDGFAP04085 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.98■□□□□ 0.47
PDGFAP04085 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
PDGFAP04085 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PDGFAP04085 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFAP04085 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFAP04085 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.97■□□□□ 0.47
PDGFAP04085 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.97■□□□□ 0.47
PDGFAP04085 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.97■□□□□ 0.47
PDGFAP04085 AL031133.1-201ENST00000406807 723 ntBASIC17.97■□□□□ 0.47
PDGFAP04085 HMGA1P5-201ENST00000412453 271 ntBASIC17.97■□□□□ 0.47
PDGFAP04085 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PDGFAP04085 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PDGFAP04085 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PDGFAP04085 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 AC091076.1-201ENST00000610741 619 ntBASIC17.97■□□□□ 0.47
PDGFAP04085 HLA-A-209ENST00000638375 975 ntBASIC17.97■□□□□ 0.47
PDGFAP04085 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFAP04085 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PDGFAP04085 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PDGFAP04085 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFAP04085 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
PDGFAP04085 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFAP04085 FAM8A6P-201ENST00000407496 1135 ntBASIC17.96■□□□□ 0.47
PDGFAP04085 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.96■□□□□ 0.47
PDGFAP04085 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.96■□□□□ 0.47
PDGFAP04085 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.96■□□□□ 0.47
PDGFAP04085 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDGFAP04085 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFAP04085 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDGFAP04085 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFAP04085 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFAP04085 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDGFAP04085 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFAP04085 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFAP04085 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms