Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNA1P01562 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNA1P01562 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.26■□□□□ 0.03
IFNA1P01562 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNA1P01562 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNA1P01562 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNA1P01562 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNA1P01562 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.26■□□□□ 0.03
IFNA1P01562 PRORSD1P-202ENST00000563365 2154 ntBASIC15.26■□□□□ 0.03
IFNA1P01562 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.26■□□□□ 0.03
IFNA1P01562 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
IFNA1P01562 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
IFNA1P01562 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
IFNA1P01562 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
IFNA1P01562 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNA1P01562 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.25■□□□□ 0.03
IFNA1P01562 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.25■□□□□ 0.03
IFNA1P01562 AC007322.3-201ENST00000426526 701 ntBASIC15.25■□□□□ 0.03
IFNA1P01562 KRT16P3-201ENST00000439127 1283 ntBASIC15.25■□□□□ 0.03
IFNA1P01562 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 UNC93B8-201ENST00000511903 705 ntBASIC15.25■□□□□ 0.03
IFNA1P01562 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 AC105233.4-201ENST00000642045 216 ntBASIC15.25■□□□□ 0.03
IFNA1P01562 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
IFNA1P01562 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IFNA1P01562 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.24■□□□□ 0.03
IFNA1P01562 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNA1P01562 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.24■□□□□ 0.03
IFNA1P01562 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.24■□□□□ 0.03
IFNA1P01562 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
IFNA1P01562 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNA1P01562 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
IFNA1P01562 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNA1P01562 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNA1P01562 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IFNA1P01562 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNA1P01562 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.24■□□□□ 0.03
IFNA1P01562 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.23■□□□□ 0.03
IFNA1P01562 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.23■□□□□ 0.03
IFNA1P01562 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IFNA1P01562 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
IFNA1P01562 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms