Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TIMP1P01033 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TIMP1P01033 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.88■□□□□ 0.93
TIMP1P01033 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.88■□□□□ 0.93
TIMP1P01033 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TIMP1P01033 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TIMP1P01033 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.88■□□□□ 0.93
TIMP1P01033 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.88■□□□□ 0.93
TIMP1P01033 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TIMP1P01033 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.88■□□□□ 0.93
TIMP1P01033 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.88■□□□□ 0.93
TIMP1P01033 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.88■□□□□ 0.93
TIMP1P01033 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
TIMP1P01033 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.88■□□□□ 0.93
TIMP1P01033 EP400NL-214ENST00000641289 2402 ntBASIC20.88■□□□□ 0.93
TIMP1P01033 AL162741.1-201ENST00000565563 1558 ntBASIC20.88■□□□□ 0.93
TIMP1P01033 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TIMP1P01033 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.87■□□□□ 0.93
TIMP1P01033 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TIMP1P01033 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TIMP1P01033 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TIMP1P01033 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TIMP1P01033 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TIMP1P01033 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.87■□□□□ 0.93
TIMP1P01033 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TIMP1P01033 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.87■□□□□ 0.93
TIMP1P01033 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TIMP1P01033 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TIMP1P01033 AL732292.2-201ENST00000609649 430 ntBASIC20.87■□□□□ 0.93
TIMP1P01033 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TIMP1P01033 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
TIMP1P01033 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TIMP1P01033 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TIMP1P01033 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.86■□□□□ 0.93
TIMP1P01033 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.86■□□□□ 0.93
TIMP1P01033 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
TIMP1P01033 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMP1P01033 AC093525.10-201ENST00000625130 1569 ntBASIC20.86■□□□□ 0.93
TIMP1P01033 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMP1P01033 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMP1P01033 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.86■□□□□ 0.93
TIMP1P01033 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TIMP1P01033 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMP1P01033 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMP1P01033 AL121772.3-201ENST00000610840 674 ntBASIC20.86■□□□□ 0.93
TIMP1P01033 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TIMP1P01033 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TIMP1P01033 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TIMP1P01033 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMP1P01033 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TIMP1P01033 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TIMP1P01033 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 KRT18P1-202ENST00000452408 1331 ntBASIC20.85■□□□□ 0.93
TIMP1P01033 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.85■□□□□ 0.93
TIMP1P01033 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.85■□□□□ 0.93
TIMP1P01033 AC091304.2-201ENST00000564639 760 ntBASIC20.85■□□□□ 0.93
TIMP1P01033 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TIMP1P01033 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMP1P01033 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.85■□□□□ 0.93
TIMP1P01033 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.84■□□□□ 0.93
TIMP1P01033 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.84■□□□□ 0.93
TIMP1P01033 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.84■□□□□ 0.93
TIMP1P01033 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.84■□□□□ 0.93
TIMP1P01033 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.84■□□□□ 0.93
TIMP1P01033 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.84■□□□□ 0.93
TIMP1P01033 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.84■□□□□ 0.93
TIMP1P01033 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.84■□□□□ 0.93
TIMP1P01033 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TIMP1P01033 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.84■□□□□ 0.93
TIMP1P01033 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
TIMP1P01033 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TIMP1P01033 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.83■□□□□ 0.93
TIMP1P01033 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.83■□□□□ 0.93
TIMP1P01033 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.83■□□□□ 0.93
TIMP1P01033 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
TIMP1P01033 AC079781.3-201ENST00000449110 356 ntBASIC20.83■□□□□ 0.93
TIMP1P01033 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TIMP1P01033 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.83■□□□□ 0.93
TIMP1P01033 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TIMP1P01033 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TIMP1P01033 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
TIMP1P01033 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms