Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.26■□□□□ 0.83
BEST1O76090 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.26■□□□□ 0.83
BEST1O76090 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
BEST1O76090 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 KRT8P11-201ENST00000409686 1436 ntBASIC20.26■□□□□ 0.83
BEST1O76090 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.25■□□□□ 0.83
BEST1O76090 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
BEST1O76090 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BEST1O76090 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 AC096733.2-201ENST00000609937 1394 ntBASIC20.25■□□□□ 0.83
BEST1O76090 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
BEST1O76090 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.25■□□□□ 0.83
BEST1O76090 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST1O76090 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST1O76090 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST1O76090 AC012306.2-201ENST00000609350 630 ntBASIC20.25■□□□□ 0.83
BEST1O76090 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
BEST1O76090 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
BEST1O76090 AC010947.1-201ENST00000623454 693 ntBASIC20.25■□□□□ 0.83
BEST1O76090 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST1O76090 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BEST1O76090 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST1O76090 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
BEST1O76090 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.24■□□□□ 0.83
BEST1O76090 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
BEST1O76090 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.24■□□□□ 0.83
BEST1O76090 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.24■□□□□ 0.83
BEST1O76090 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.24■□□□□ 0.83
BEST1O76090 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
BEST1O76090 MFAP1P1-201ENST00000442257 1255 ntBASIC20.24■□□□□ 0.83
BEST1O76090 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.24■□□□□ 0.83
BEST1O76090 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 AP005242.2-201ENST00000580065 1175 ntBASIC20.24■□□□□ 0.83
BEST1O76090 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.24■□□□□ 0.83
BEST1O76090 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.24■□□□□ 0.83
BEST1O76090 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
BEST1O76090 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
BEST1O76090 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST1O76090 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
BEST1O76090 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
BEST1O76090 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.23■□□□□ 0.83
BEST1O76090 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.23■□□□□ 0.83
BEST1O76090 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.23■□□□□ 0.83
BEST1O76090 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
BEST1O76090 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BEST1O76090 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.23■□□□□ 0.83
BEST1O76090 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
BEST1O76090 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
BEST1O76090 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
BEST1O76090 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
BEST1O76090 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
BEST1O76090 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms