Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PRAMEF4O60810 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRAMEF4O60810 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRAMEF4O60810 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PRAMEF4O60810 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.55■□□□□ 0.56
PRAMEF4O60810 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PRAMEF4O60810 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 AC004408.2-201ENST00000623613 2777 ntBASIC18.55■□□□□ 0.56
PRAMEF4O60810 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF4O60810 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
PRAMEF4O60810 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.55■□□□□ 0.56
PRAMEF4O60810 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF4O60810 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF4O60810 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 AL160286.2-201ENST00000567150 934 ntBASIC18.54■□□□□ 0.56
PRAMEF4O60810 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF4O60810 AL359736.2-201ENST00000621992 437 ntBASIC18.54■□□□□ 0.56
PRAMEF4O60810 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.54■□□□□ 0.56
PRAMEF4O60810 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 IRX1P1-201ENST00000438849 1838 ntBASIC18.53■□□□□ 0.56
PRAMEF4O60810 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 FAM201B-201ENST00000458407 597 ntBASIC18.53■□□□□ 0.56
PRAMEF4O60810 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PRAMEF4O60810 KRT8P41-201ENST00000533985 1514 ntBASIC18.53■□□□□ 0.56
PRAMEF4O60810 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF4O60810 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEF4O60810 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF4O60810 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEF4O60810 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 AC098590.1-201ENST00000468126 897 ntBASIC18.52■□□□□ 0.56
PRAMEF4O60810 Z85996.1-201ENST00000494644 937 ntBASIC18.52■□□□□ 0.56
PRAMEF4O60810 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF4O60810 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF4O60810 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF4O60810 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF4O60810 AL020996.1-203ENST00000536896 2307 ntBASIC18.52■□□□□ 0.56
PRAMEF4O60810 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF4O60810 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF4O60810 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF4O60810 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF4O60810 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF4O60810 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.52■□□□□ 0.55
PRAMEF4O60810 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF4O60810 AC093503.3-201ENST00000624917 2352 ntBASIC18.52■□□□□ 0.55
PRAMEF4O60810 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF4O60810 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PRAMEF4O60810 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF4O60810 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF4O60810 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PRAMEF4O60810 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms