Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNT1O60563 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNT1O60563 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.91■■□□□ 1.1
CCNT1O60563 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.91■■□□□ 1.1
CCNT1O60563 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCNT1O60563 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNT1O60563 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
CCNT1O60563 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNT1O60563 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCNT1O60563 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
CCNT1O60563 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNT1O60563 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNT1O60563 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNT1O60563 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNT1O60563 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CCNT1O60563 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNT1O60563 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCNT1O60563 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNT1O60563 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.9■■□□□ 1.1
CCNT1O60563 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNT1O60563 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNT1O60563 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNT1O60563 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNT1O60563 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNT1O60563 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNT1O60563 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNT1O60563 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNT1O60563 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNT1O60563 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNT1O60563 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNT1O60563 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNT1O60563 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNT1O60563 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.89■■□□□ 1.09
CCNT1O60563 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNT1O60563 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNT1O60563 Z85996.1-201ENST00000494644 937 ntBASIC21.89■■□□□ 1.09
CCNT1O60563 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNT1O60563 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNT1O60563 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.89■■□□□ 1.09
CCNT1O60563 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.89■■□□□ 1.09
CCNT1O60563 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNT1O60563 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNT1O60563 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNT1O60563 AL031985.4-201ENST00000642138 673 ntBASIC21.89■■□□□ 1.09
CCNT1O60563 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNT1O60563 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.89■■□□□ 1.09
CCNT1O60563 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNT1O60563 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CCNT1O60563 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNT1O60563 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CCNT1O60563 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
CCNT1O60563 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCNT1O60563 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.88■■□□□ 1.09
CCNT1O60563 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.88■■□□□ 1.09
CCNT1O60563 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNT1O60563 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCNT1O60563 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNT1O60563 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNT1O60563 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CCNT1O60563 AC093827.2-201ENST00000512654 315 ntBASIC21.88■■□□□ 1.09
CCNT1O60563 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNT1O60563 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CCNT1O60563 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.88■■□□□ 1.09
CCNT1O60563 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCNT1O60563 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNT1O60563 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNT1O60563 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNT1O60563 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNT1O60563 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNT1O60563 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CCNT1O60563 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CCNT1O60563 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.87■■□□□ 1.09
CCNT1O60563 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.87■■□□□ 1.09
CCNT1O60563 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms