Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LST1O00453 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.55□□□□□ -0.4
LST1O00453 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LST1O00453 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.54□□□□□ -0.4
LST1O00453 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
LST1O00453 AC134043.2-201ENST00000624206 2238 ntBASIC12.54□□□□□ -0.4
LST1O00453 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LST1O00453 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.54□□□□□ -0.4
LST1O00453 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 TEX21P-204ENST00000641479 1693 ntBASIC12.54□□□□□ -0.4
LST1O00453 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LST1O00453 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LST1O00453 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LST1O00453 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LST1O00453 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.53□□□□□ -0.4
LST1O00453 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.53□□□□□ -0.4
LST1O00453 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.53□□□□□ -0.4
LST1O00453 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC12.53□□□□□ -0.4
LST1O00453 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC12.53□□□□□ -0.4
LST1O00453 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC12.53□□□□□ -0.4
LST1O00453 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.53□□□□□ -0.4
LST1O00453 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LST1O00453 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
LST1O00453 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC12.53□□□□□ -0.4
LST1O00453 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.53□□□□□ -0.4
LST1O00453 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LST1O00453 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.53□□□□□ -0.4
LST1O00453 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.52□□□□□ -0.4
LST1O00453 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
LST1O00453 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
LST1O00453 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.52□□□□□ -0.4
LST1O00453 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
LST1O00453 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LST1O00453 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms