Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MIR548O-201ENST00000408583 114 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RPL21P50-201ENST00000417698 477 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 Z83839.1-201ENST00000423412 630 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RPSAP76-201ENST00000444599 853 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RPL36P4-201ENST00000456725 318 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL361P-201ENST00000470785 298 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL125P-201ENST00000480790 294 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AC073861.1-201ENST00000496294 459 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AC025171.2-202ENST00000505541 402 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AC098827.1-201ENST00000514630 667 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU7-153P-201ENST00000516455 62 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL703P-201ENST00000578485 302 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 BOD1P1-201ENST00000584421 436 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 MRPS5P4-201ENST00000592830 325 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AL353149.1-201ENST00000610667 244 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR6081-201ENST00000613785 97 ntBASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 ZNF548-202ENST00000366197 4955 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 DHX40-201ENST00000251241 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP3-3Q9BYR6 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 PLSCR4-201ENST00000354952 3303 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 CSHL1-202ENST00000309894 669 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AL590240.1-201ENST00000334118 313 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 Y_RNA.140-201ENST00000363474 103 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 PARP1-201ENST00000366790 570 ntTSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR646-201ENST00000385067 94 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RNA5SP377-201ENST00000390852 112 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RNA5SP376-201ENST00000390949 112 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 SDHCP2-201ENST00000398565 501 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR885-201ENST00000401316 74 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU6-613P-201ENST00000410412 108 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SKP200-201ENST00000410564 320 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AC007568.1-201ENST00000422912 471 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AC113412.1-201ENST00000425840 504 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AC130689.1-201ENST00000451056 408 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL50P-201ENST00000461146 298 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL334P-201ENST00000465067 279 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL762P-201ENST00000469864 289 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL40P-201ENST00000474689 342 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL822P-201ENST00000475674 296 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RPS27P22-201ENST00000478056 241 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 KRTDAP-203ENST00000484218 451 ntTSL 2 BASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 KHDC1P1-201ENST00000511053 508 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU6-807P-201ENST00000516805 107 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 RPL10P19-201ENST00000519013 301 ntBASIC4.63□□□□□ -1.67
KRTAP3-3Q9BYR6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms