RNA–Protein interactions for RNA: ENST00000410564.1

RN7SKP200-201, Transcript of RNA, 7SK small nuclear pseudogene 200, humanhuman

BASIC

Gene RN7SKP200, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP200-201ENST00000410564 AEBP2Q6ZN18 517 aaPredicted RBP10.42□□□□□ -0.74
RN7SKP200-201ENST00000410564 CHIC1Q5VXU3 224 aa9.85□□□□□ -0.83
RN7SKP200-201ENST00000410564 SENP3Q9H4L4 574 aaPredicted RBP8.94□□□□□ -0.98
RN7SKP200-201ENST00000410564 PHF23Q9BUL5 403 aaPredicted RBP8.79□□□□□ -1
RN7SKP200-201ENST00000410564 FOXD1Q16676 465 aa8.31□□□□□ -1.08
RN7SKP200-201ENST00000410564 PLPPR3Q6T4P5 718 aa7.85□□□□□ -1.15
RN7SKP200-201ENST00000410564 MSH5O43196 834 aa7.84□□□□□ -1.15
RN7SKP200-201ENST00000410564 PIAS4Q8N2W9 510 aaPredicted RBP7.75□□□□□ -1.17
RN7SKP200-201ENST00000410564 POTEDQ86YR6 584 aa7.74□□□□□ -1.17
RN7SKP200-201ENST00000410564 PPP6R1Q9UPN7 881 aa7.7□□□□□ -1.18
RN7SKP200-201ENST00000410564 ADRA2BP18089 450 aa7.66□□□□□ -1.18
RN7SKP200-201ENST00000410564 SCAF1Q9H7N4 1312 aaKnown RBP7.07□□□□□ -1.28
RN7SKP200-201ENST00000410564 DMRT2Q9Y5R5 561 aa7.07□□□□□ -1.28
RN7SKP200-201ENST00000410564 MAPK8IP2Q13387 824 aaPredicted RBP7.05□□□□□ -1.28
RN7SKP200-201ENST00000410564 PPP4R3CPQ6ZMV5 832 aa6.85□□□□□ -1.31
RN7SKP200-201ENST00000410564 HOXD11P31277 338 aaPredicted RBP6.79□□□□□ -1.32
RN7SKP200-201ENST00000410564 CNKSR2Q8WXI2 1034 aa6.76□□□□□ -1.33
RN7SKP200-201ENST00000410564 DCAF8L1A6NGE4 600 aa6.73□□□□□ -1.33
RN7SKP200-201ENST00000410564 CACNB1Q02641 598 aaPredicted RBP6.73□□□□□ -1.33
RN7SKP200-201ENST00000410564 RNF216Q9NWF9 866 aaPredicted RBP6.72□□□□□ -1.33
RN7SKP200-201ENST00000410564 RNF39Q9H2S5 420 aa6.67□□□□□ -1.34
RN7SKP200-201ENST00000410564 DNAJC5BQ9UF47 199 aa6.62□□□□□ -1.35
RN7SKP200-201ENST00000410564 NCBP3Q53F19 620 aaKnown RBP6.59□□□□□ -1.35
RN7SKP200-201ENST00000410564 C1QBPQ07021 282 aaKnown RBP6.58□□□□□ -1.36
RN7SKP200-201ENST00000410564 NPM3O75607 178 aaKnown RBP6.48□□□□□ -1.37
RN7SKP200-201ENST00000410564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.44□□□□□ -1.38
RN7SKP200-201ENST00000410564 U3KPZ7 1027 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP200-201ENST00000410564 KCNA4P22459 653 aa6.27□□□□□ -1.41
RN7SKP200-201ENST00000410564 SPINK5Q9NQ38 1064 aaPredicted RBP6.22□□□□□ -1.41
RN7SKP200-201ENST00000410564 CAPN15O75808 1086 aa6.21□□□□□ -1.42
RN7SKP200-201ENST00000410564 DSG3P32926 999 aa6.21□□□□□ -1.42
RN7SKP200-201ENST00000410564 SLC4A2P04920 1241 aa6.2□□□□□ -1.42
RN7SKP200-201ENST00000410564 APLP2Q06481 763 aa6.16□□□□□ -1.42
RN7SKP200-201ENST00000410564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.14□□□□□ -1.43
RN7SKP200-201ENST00000410564 HNRNPUL2Q1KMD3 747 aaKnown RBP6.14□□□□□ -1.43
RN7SKP200-201ENST00000410564 ZNF219Q9P2Y4 722 aaPredicted RBP6.12□□□□□ -1.43
RN7SKP200-201ENST00000410564 TRHP20396 242 aaPredicted RBP6.09□□□□□ -1.43
RN7SKP200-201ENST00000410564 SAMD1Q6SPF0 538 aaPredicted RBP6.09□□□□□ -1.43
RN7SKP200-201ENST00000410564 POTEHQ6S545 545 aa6.05□□□□□ -1.44
RN7SKP200-201ENST00000410564 ABCB7O75027 752 aa6.04□□□□□ -1.44
RN7SKP200-201ENST00000410564 MYCNP04198 464 aaPredicted RBP6.01□□□□□ -1.45
RN7SKP200-201ENST00000410564 RBM42Q9BTD8 480 aaKnown RBP5.96□□□□□ -1.46
RN7SKP200-201ENST00000410564 POLA2Q14181 598 aa5.92□□□□□ -1.46
RN7SKP200-201ENST00000410564 SLC4A1APQ9BWU0 796 aaKnown RBP5.91□□□□□ -1.46
RN7SKP200-201ENST00000410564 FOXD4L1Q9NU39 408 aa5.9□□□□□ -1.46
RN7SKP200-201ENST00000410564 ATF5Q9Y2D1 282 aaPredicted RBP5.84□□□□□ -1.47
RN7SKP200-201ENST00000410564 ZBTB12Q9Y330 459 aaPredicted RBP5.84□□□□□ -1.47
RN7SKP200-201ENST00000410564 CHRDL2Q6WN34 429 aa5.83□□□□□ -1.48
RN7SKP200-201ENST00000410564 AKT1S1Q96B36 256 aa5.8□□□□□ -1.48
RN7SKP200-201ENST00000410564 ZBTB22O15209 634 aa5.76□□□□□ -1.49
RN7SKP200-201ENST00000410564 ATXN8OSP0DMR3 200 aa5.75□□□□□ -1.49
RN7SKP200-201ENST00000410564 OSCARQ8IYS5 282 aa5.73□□□□□ -1.49
RN7SKP200-201ENST00000410564 REM2Q8IYK8 340 aaPredicted RBP5.72□□□□□ -1.49
RN7SKP200-201ENST00000410564 PIP4P2Q8N4L2 257 aa5.67□□□□□ -1.5
RN7SKP200-201ENST00000410564 PITPNM1O00562 1244 aa5.65□□□□□ -1.5
RN7SKP200-201ENST00000410564 SP7Q8TDD2 431 aaPredicted RBP5.65□□□□□ -1.5
RN7SKP200-201ENST00000410564 SPDYE2BA6NHP3 402 aa5.64□□□□□ -1.51
RN7SKP200-201ENST00000410564 SPDYE6P0CI01 402 aa5.64□□□□□ -1.51
RN7SKP200-201ENST00000410564 FXR2P51116 673 aaKnown RBP eCLIP5.64□□□□□ -1.51
RN7SKP200-201ENST00000410564 FBLN2P98095 1184 aa5.64□□□□□ -1.51
RN7SKP200-201ENST00000410564 SPDYE2Q495Y8 402 aa5.64□□□□□ -1.51
RN7SKP200-201ENST00000410564 MKRN4PQ13434 485 aaPredicted RBP5.58□□□□□ -1.52
RN7SKP200-201ENST00000410564 HAX1O00165 279 aa5.57□□□□□ -1.52
RN7SKP200-201ENST00000410564 SSUH2Q9Y2M2 353 aa5.56□□□□□ -1.52
RN7SKP200-201ENST00000410564 SPDYE1Q8NFV5 336 aaPredicted RBP5.55□□□□□ -1.52
RN7SKP200-201ENST00000410564 ZNF692Q9BU19 519 aaPredicted RBP5.54□□□□□ -1.52
RN7SKP200-201ENST00000410564 CLEC11AQ9Y240 323 aa5.52□□□□□ -1.53
RN7SKP200-201ENST00000410564 PRKAR2AP13861 404 aaKnown RBP5.51□□□□□ -1.53
RN7SKP200-201ENST00000410564 EVX2Q03828 476 aa5.49□□□□□ -1.53
RN7SKP200-201ENST00000410564 EHMT2Q96KQ7 1210 aa5.48□□□□□ -1.53
RN7SKP200-201ENST00000410564 C19orf67A6NJJ6 358 aa5.46□□□□□ -1.54
RN7SKP200-201ENST00000410564 PABPN1Q86U42 306 aaKnown RBP eCLIP5.45□□□□□ -1.54
RN7SKP200-201ENST00000410564 CSRNP3Q8WYN3 585 aa5.44□□□□□ -1.54
RN7SKP200-201ENST00000410564 PRR29P0C7W0 189 aa5.43□□□□□ -1.54
RN7SKP200-201ENST00000410564 CHADLQ6NUI6 762 aa5.41□□□□□ -1.54
RN7SKP200-201ENST00000410564 GABBR2O75899 941 aa5.38□□□□□ -1.55
RN7SKP200-201ENST00000410564 FARP1Q9Y4F1 1045 aaPredicted RBP5.35□□□□□ -1.55
RN7SKP200-201ENST00000410564 CLCN6P51797 869 aa5.34□□□□□ -1.55
RN7SKP200-201ENST00000410564 CD44P16070 742 aaKnown RBP5.33□□□□□ -1.56
RN7SKP200-201ENST00000410564 STAG3Q9UJ98 1225 aa5.32□□□□□ -1.56
RN7SKP200-201ENST00000410564 LHX8Q68G74 356 aa5.29□□□□□ -1.56
RN7SKP200-201ENST00000410564 SPDYE4A6NLX3 237 aa5.28□□□□□ -1.56
RN7SKP200-201ENST00000410564 CREBZFQ9NS37 354 aa5.28□□□□□ -1.56
RN7SKP200-201ENST00000410564 ZNF579Q8NAF0 562 aaKnown RBP5.27□□□□□ -1.57
RN7SKP200-201ENST00000410564 POTEIP0CG38 1075 aa5.26□□□□□ -1.57
RN7SKP200-201ENST00000410564 ZRANB1Q9UGI0 708 aa5.24□□□□□ -1.57
RN7SKP200-201ENST00000410564 DCBLD2Q96PD2 775 aa5.22□□□□□ -1.57
RN7SKP200-201ENST00000410564 PAK3O75914 559 aaPredicted RBP5.21□□□□□ -1.58
RN7SKP200-201ENST00000410564 NPM1P06748 294 aaKnown RBP eCLIP5.2□□□□□ -1.58
RN7SKP200-201ENST00000410564 MNX1P50219 401 aaPredicted RBP5.19□□□□□ -1.58
RN7SKP200-201ENST00000410564 GALR2O43603 387 aaPredicted RBP5.18□□□□□ -1.58
RN7SKP200-201ENST00000410564 PROM2Q8N271 834 aa5.18□□□□□ -1.58
RN7SKP200-201ENST00000410564 PHF12Q96QT6 1004 aa5.14□□□□□ -1.59
RN7SKP200-201ENST00000410564 ASTLQ6HA08 431 aaPredicted RBP5.1□□□□□ -1.59
RN7SKP200-201ENST00000410564 OTUD5Q96G74 571 aa5.09□□□□□ -1.59
RN7SKP200-201ENST00000410564 MS4A3Q96HJ5 214 aa5.09□□□□□ -1.59
RN7SKP200-201ENST00000410564 POTEB2H3BUK9 544 aa5.08□□□□□ -1.6
RN7SKP200-201ENST00000410564 PELP1Q8IZL8 1130 aaKnown RBP5.08□□□□□ -1.6
RN7SKP200-201ENST00000410564 CCDC61Q9Y6R9 512 aa5.08□□□□□ -1.6
RN7SKP200-201ENST00000410564 ATMINO43313 823 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms