Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SPCS1Q9Y6A9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 AL031598.1-201ENST00000561511 1773 ntBASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 NKILA-202ENST00000614771 2598 ntBASIC13.25□□□□□ -0.29
SPCS1Q9Y6A9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 Z98044.1-201ENST00000632503 1764 ntBASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 AC011676.5-201ENST00000624864 2660 ntBASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.24□□□□□ -0.29
SPCS1Q9Y6A9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 PCDH8P1-201ENST00000428983 2773 ntBASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS1Q9Y6A9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms