Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 FP475955.4-201ENST00000623131 1990 ntBASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 NOC2LP2-201ENST00000407594 1944 ntBASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 AL031432.3-201ENST00000607698 485 ntBASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 AC106820.2-201ENST00000563775 3264 ntBASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCL1Q9Y2P8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RCL1Q9Y2P8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 AP000997.3-201ENST00000623333 2250 ntBASIC15.77■□□□□ 0.11
RCL1Q9Y2P8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms