Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SLC52A1Q9NWF4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC27.71■■■□□ 2.03
SLC52A1Q9NWF4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
SLC52A1Q9NWF4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC27.71■■■□□ 2.03
SLC52A1Q9NWF4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC27.71■■■□□ 2.03
SLC52A1Q9NWF4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC27.7■■■□□ 2.03
SLC52A1Q9NWF4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC27.7■■■□□ 2.03
SLC52A1Q9NWF4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SLC52A1Q9NWF4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
SLC52A1Q9NWF4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.03
SLC52A1Q9NWF4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.03
SLC52A1Q9NWF4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC27.7■■■□□ 2.03
SLC52A1Q9NWF4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 AC092119.3-201ENST00000612618 583 ntBASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SLC52A1Q9NWF4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 AC034232.1-201ENST00000506026 1064 ntBASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SLC52A1Q9NWF4 LINC00565-201ENST00000562710 2331 ntBASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SLC52A1Q9NWF4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 AC092597.1-201ENST00000487352 616 ntBASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC27.67■■■□□ 2.02
SLC52A1Q9NWF4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 MIR3652-201ENST00000579335 131 ntBASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 AC092329.2-201ENST00000598402 547 ntBASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC27.66■■■□□ 2.02
SLC52A1Q9NWF4 AC104417.2-201ENST00000562989 1793 ntBASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 MIR3180-1-201ENST00000580374 94 ntBASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 MIR3180-3-201ENST00000584616 94 ntBASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC52A1Q9NWF4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms